STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP3Far upstream element binding protein 3. (567 aa)    
Predicted Functional Partners:
PUF60
poly(U) binding splicing factor 60.
   
 
 0.788
ENSPCAP00000007299
annotation not available
   
 
 0.691
PARN
poly(A)-specific ribonuclease.
    
 0.651
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
   
 
 0.640
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.638
ENSPCAP00000004811
annotation not available
   
 
 0.622
FUBP1
Far upstream element binding protein 1.
  
  
0.622
EXOSC2
Exosome component 2.
   
  0.620
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.609
AKT3
AKT serine/threonine kinase 3.
   
  0.604
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.