CD40LG protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CD40LG

CD40 ligand. (261 aa)

Predicted Functional Partners:

ICOS

0.968

ENSPCAP00000012735

0.939

ENSPCAP00000000155

0.925

ENSPCAP00000007574

0.920

TNFRSF21

0.918

BCL6

0.854

ENSPCAP00000015251

0.835

TNF

0.822

ENSPCAP00000010272

0.815

TRAF3

0.806

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL6	CD40LG	ENSPCAP00000007157	ENSPCAP00000001650	BCL6 transcription repressor.	CD40 ligand.	0.854
BCL6	ENSPCAP00000007574	ENSPCAP00000007157	ENSPCAP00000007574	BCL6 transcription repressor.	annotation not available	0.504
BCL6	ENSPCAP00000015251	ENSPCAP00000007157	ENSPCAP00000015251	BCL6 transcription repressor.	annotation not available	0.569
BCL6	ICOS	ENSPCAP00000007157	ENSPCAP00000012061	BCL6 transcription repressor.	Inducible T cell costimulator.	0.672
BCL6	TRAF3	ENSPCAP00000007157	ENSPCAP00000009522	BCL6 transcription repressor.	TNF receptor associated factor 3.	0.448
CD40LG	BCL6	ENSPCAP00000001650	ENSPCAP00000007157	CD40 ligand.	BCL6 transcription repressor.	0.854
CD40LG	ENSPCAP00000000155	ENSPCAP00000001650	ENSPCAP00000000155	CD40 ligand.	annotation not available	0.925
CD40LG	ENSPCAP00000007574	ENSPCAP00000001650	ENSPCAP00000007574	CD40 ligand.	annotation not available	0.920
CD40LG	ENSPCAP00000010272	ENSPCAP00000001650	ENSPCAP00000010272	CD40 ligand.	annotation not available	0.815
CD40LG	ENSPCAP00000012735	ENSPCAP00000001650	ENSPCAP00000012735	CD40 ligand.	annotation not available	0.939
CD40LG	ENSPCAP00000015251	ENSPCAP00000001650	ENSPCAP00000015251	CD40 ligand.	annotation not available	0.835
CD40LG	ICOS	ENSPCAP00000001650	ENSPCAP00000012061	CD40 ligand.	Inducible T cell costimulator.	0.968
CD40LG	TNF	ENSPCAP00000001650	ENSPCAP00000007019	CD40 ligand.	Tumor necrosis factor.	0.822
CD40LG	TNFRSF21	ENSPCAP00000001650	ENSPCAP00000003312	CD40 ligand.	TNF receptor superfamily member 21.	0.918
CD40LG	TRAF3	ENSPCAP00000001650	ENSPCAP00000009522	CD40 ligand.	TNF receptor associated factor 3.	0.806
ENSPCAP00000000155	CD40LG	ENSPCAP00000000155	ENSPCAP00000001650	annotation not available	CD40 ligand.	0.925
ENSPCAP00000000155	ENSPCAP00000010272	ENSPCAP00000000155	ENSPCAP00000010272	annotation not available	annotation not available	0.461
ENSPCAP00000000155	TNF	ENSPCAP00000000155	ENSPCAP00000007019	annotation not available	Tumor necrosis factor.	0.794
ENSPCAP00000000155	TRAF3	ENSPCAP00000000155	ENSPCAP00000009522	annotation not available	TNF receptor associated factor 3.	0.958
ENSPCAP00000007574	BCL6	ENSPCAP00000007574	ENSPCAP00000007157	annotation not available	BCL6 transcription repressor.	0.504