STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001656annotation not available (266 aa)    
Predicted Functional Partners:
MDM2
MDM2 proto-oncogene.
    
 
 0.969
KDM1A
Lysine demethylase 1A.
    
 0.885
RCOR1
REST corepressor 1.
    
 0.877
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.846
CDH1
Cadherin 1.
    
 0.845
CDH3
Cadherin 3.
    
 0.845
FBXL14
F-box and leucine rich repeat protein 14.
   
 
 0.835
GSE1
Gse1 coiled-coil protein.
    
   0.832
HMG20B
High mobility group 20B.
    
   0.832
HMG20A
High mobility group 20A.
    
   0.832
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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