Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001658annotation not available (355 aa)    
Predicted Functional Partners:
MAN1A2
Mannosidase alpha class 1A member 2.
      
 0.912
ENSPCAP00000004463
annotation not available
    
 
 0.903
TTC19
Tetratricopeptide repeat domain 19.
   
 
 0.698
RCE1
Ras converting CAAX endopeptidase 1.
      
 0.692
FERMT1
Fermitin family member 1.
      
 0.692
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.673
DERL3
Derlin 3.
   
 0.666
DERL2
Derlin 2.
   
 0.666
ENSPCAP00000009641
annotation not available
   
 0.666
SLC35A1
Solute carrier family 35 member A1.
    
 
 0.611
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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