STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGI3Leucine rich repeat LGI family member 3. (548 aa)    
Predicted Functional Partners:
ADAM23
ADAM metallopeptidase domain 23.
   
 
 0.766
ADAM22
ADAM metallopeptidase domain 22.
   
 
 0.739
ENSPCAP00000001574
annotation not available
    
 
 0.726
SFTPC
Surfactant protein C.
   
  
 0.713
CHMP7
Charged multivesicular body protein 7.
      
 0.692
ENSPCAP00000014868
annotation not available
    
 0.692
ANKRD39
Ankyrin repeat domain 39.
    
 0.648
FGF18
Fibroblast growth factor 18.
    
 0.647
MAG
Myelin associated glycoprotein.
   
 
  0.593
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.586
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.