STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41ATransmembrane protein 41A. (261 aa)    
Predicted Functional Partners:
ENSPCAP00000006681
annotation not available
  
 
  0.798
ENSPCAP00000005371
annotation not available
  
 
  0.790
GLDC
Glycine decarboxylase.
   
 
  0.786
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.761
ENSPCAP00000010878
annotation not available
     
 0.718
ENSPCAP00000009191
annotation not available
    
  0.715
DLAT
Dihydrolipoamide S-acetyltransferase.
    
 0.670
SEPHS1
Selenophosphate synthetase 1.
  
 
  0.638
PDHX
Pyruvate dehydrogenase complex component X.
    
 0.621
OGDH
Oxoglutarate dehydrogenase.
    
  0.600
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.