Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41ATransmembrane protein 41A. (261 aa)    
Predicted Functional Partners:
TMEM64
Transmembrane protein 64.
      
 0.911
TMEM126A
Transmembrane protein 126A.
      
 0.862
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.725
ENSPCAP00000006681
annotation not available
  
 
  0.692
GLDC
Glycine decarboxylase.
   
 
  0.672
ENSPCAP00000005371
annotation not available
  
 
  0.672
DLAT
Dihydrolipoamide S-acetyltransferase.
    
 0.672
SLC66A3
Solute carrier family 66 member 3.
      
 0.667
ENSPCAP00000005461
annotation not available
     
  0.659
OXA1L
OXA1L mitochondrial inner membrane protein.
     
 0.637
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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