STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCGSarcoglycan gamma. (292 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 
 0.722
SGCA
Sarcoglycan alpha.
   
 
 0.722
ENSPCAP00000010351
annotation not available
   
 
 0.684
FLNC
Filamin C.
   
 
 0.683
SGCD
Sarcoglycan delta.
  
  
0.575
NOS1AP
Nitric oxide synthase 1 adaptor protein.
      
 0.523
BGN
Biglycan.
      
 0.522
SGCE
Sarcoglycan epsilon.
   
 
 0.519
HARS1
histidyl-tRNA synthetase 1.
    
 
 0.432
SNTB1
Syntrophin beta 1.
      
 0.424
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.