STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf46Chromosome 5 open reading frame 46. (85 aa)    
Predicted Functional Partners:
REXO5
RNA exonuclease 5.
      
 0.565
LYPD4
LY6/PLAUR domain containing 4.
  
     0.519
SPINK5
Serine peptidase inhibitor, Kazal type 5.
  
    0.470
CSF2RB
Colony stimulating factor 2 receptor beta common subunit.
  
     0.469
FAM107B
Family with sequence similarity 107 member B.
      
 0.462
ENSPCAP00000005205
annotation not available
   
  
 0.416
ALPK1
Alpha kinase 1.
      
 0.404
ENSPCAP00000013814
annotation not available
   
  
 0.404
PVRIG
PVR related immunoglobulin domain containing.
  
     0.401
MBD6
methyl-CpG binding domain protein 6.
  
     0.401
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.