STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRT3Proline rich transmembrane protein 3. (592 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.839
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.816
ENSPCAP00000014229
annotation not available
    
 0.805
UBC
Ubiquitin C.
    
 0.804
OASL
2'-5'-oligoadenylate synthetase like.
    
 0.804
ENSPCAP00000015060
annotation not available
    
 0.804
UBD
Ubiquitin D.
    
 0.804
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.765
UBL7
Ubiquitin like 7.
    
 0.746
UBQLN3
Ubiquilin 3.
    
 0.746
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.