STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATAD2BGATA zinc finger domain containing 2B. (593 aa)    
Predicted Functional Partners:
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.998
ENSPCAP00000006786
annotation not available
   
 0.998
MTA1
Metastasis associated 1.
   
 0.998
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.998
MTA2
Metastasis associated 1 family member 2.
   
 0.998
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
    
 0.998
CHD5
Chromodomain helicase DNA binding protein 5.
   
 0.997
MTA3
Metastasis associated 1 family member 3.
   
 0.997
CDK2AP2
Cyclin dependent kinase 2 associated protein 2.
    
 0.991
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.990
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.