Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBKSRibokinase. (321 aa)    
Predicted Functional Partners:
RPIA
Ribose 5-phosphate isomerase A.
    
 0.945
TKT
Transketolase.
  
 0.922
TKTL1
Transketolase like 1.
  
 0.922
PRPS2
Phosphoribosyl pyrophosphate synthetase 2.
   
 0.920
ENSPCAP00000003477
annotation not available
   
 0.920
PGM2
Phosphoglucomutase 2.
  
 
 0.911
MPI
Mannose phosphate isomerase.
    
 0.905
ENSPCAP00000015757
annotation not available
  
 
 0.904
PGM2L1
Phosphoglucomutase 2 like 1.
  
 
 0.900
ENSPCAP00000007607
annotation not available
   
 0.899
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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