STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THSD4Thrombospondin type 1 domain containing 4. (1014 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
    
 0.589
ENSPCAP00000012960
annotation not available
     
 0.580
ENSPCAP00000011439
annotation not available
    
 
 0.572
SUOX
Sulfite oxidase.
      
 0.561
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
     
 0.551
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 
 0.519
POFUT2
Protein O-fucosyltransferase 2.
     
 0.516
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
   
 
 0.498
ENSPCAP00000001393
annotation not available
      
 0.495
SPON1
Spondin 1.
     
 0.492
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.