STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELZHelicase with zinc finger. (1934 aa)    
Predicted Functional Partners:
RC3H2
Ring finger and CCCH-type domains 2.
   
 
 0.713
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.711
PHF3
PHD finger protein 3.
   
  
 0.692
SMYD3
SET and MYND domain containing 3.
    
 0.655
PIWIL1
Piwi like RNA-mediated gene silencing 1.
    
 0.651
PIWIL2
Piwi like RNA-mediated gene silencing 2.
    
 0.651
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 
 0.628
ATXN2L
Ataxin 2 like.
   
 
 0.614
EP300
E1A binding protein p300.
   
 
 0.566
DDX6
DEAD-box helicase 6.
    
 0.555
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.