STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFRP1ADP ribosylation factor related protein 1. (197 aa)    
Predicted Functional Partners:
SYS1-DBNDD2
SYS1-DBNDD2 readthrough (NMD candidate).
   
 
 0.980
ENSPCAP00000006033
annotation not available
   
 0.962
ENSPCAP00000012226
annotation not available
    
 0.942
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate).
    
 0.909
ARL1
ADP ribosylation factor like GTPase 1.
    
 0.872
ENSPCAP00000002310
annotation not available
    
 0.870
RAB6A
RAB6A, member RAS oncogene family.
    
 0.870
RAB6B
RAB6B, member RAS oncogene family.
    
 0.870
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.856
TMF1
TATA element modulatory factor 1.
     
 0.849
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.