Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMUG1Single-strand-selective monofunctional uracil-DNA glycosylase 1. (271 aa)    
Predicted Functional Partners:
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
   0.953
MBD4
methyl-CpG binding domain 4, DNA glycosylase.
      
 0.912
ENSPCAP00000015084
annotation not available
  
 
 0.865
UNG
Uracil DNA glycosylase.
  
 
 0.829
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
  
 
 0.807
ENSPCAP00000013381
annotation not available
   
 0.806
ENSPCAP00000003966
annotation not available
    
   0.797
TDG
Thymine DNA glycosylase.
   
  
 0.791
FEN1
Flap structure-specific endonuclease 1.
     
 0.785
TK1
Thymidine kinase 1.
    
 0.770
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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