STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC89Coiled-coil domain containing 89. (371 aa)    
Predicted Functional Partners:
SNF8
SNF8 subunit of ESCRT-II.
      
 0.673
FBXO38
F-box protein 38.
      
 0.670
APPBP2
Amyloid beta precursor protein binding protein 2.
      
 0.617
EPB41L3
Erythrocyte membrane protein band 4.1 like 3.
      
 0.589
DCAF12
DDB1 and CUL4 associated factor 12.
      
 0.587
KLHL15
Kelch like family member 15.
      
 0.581
ENSPCAP00000003951
annotation not available
      
 0.576
NECAB1
N-terminal EF-hand calcium binding protein 1.
      
 0.565
NECAB3
N-terminal EF-hand calcium binding protein 3.
      
 0.565
FNIP1
Folliculin interacting protein 1.
      
 0.564
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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