MFNG protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MFNG

MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. (296 aa)

Predicted Functional Partners:

NOTCH1

0.979

NOTCH3

0.924

NOTCH2

0.919

NOTCH4

0.897

ENSPCAP00000007418

0.888

ENSPCAP00000009465

0.888

ENSPCAP00000012606

0.888

ENSPCAP00000015007

0.888

DLL4

0.867

LFNG

0.863

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLL4	ENSPCAP00000007418	ENSPCAP00000013737	ENSPCAP00000007418	Delta like canonical Notch ligand 4.	annotation not available	0.882
DLL4	ENSPCAP00000009465	ENSPCAP00000013737	ENSPCAP00000009465	Delta like canonical Notch ligand 4.	annotation not available	0.882
DLL4	ENSPCAP00000012606	ENSPCAP00000013737	ENSPCAP00000012606	Delta like canonical Notch ligand 4.	annotation not available	0.882
DLL4	ENSPCAP00000015007	ENSPCAP00000013737	ENSPCAP00000015007	Delta like canonical Notch ligand 4.	annotation not available	0.882
DLL4	LFNG	ENSPCAP00000013737	ENSPCAP00000003196	Delta like canonical Notch ligand 4.	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.762
DLL4	MFNG	ENSPCAP00000013737	ENSPCAP00000001743	Delta like canonical Notch ligand 4.	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.867
DLL4	NOTCH1	ENSPCAP00000013737	ENSPCAP00000007677	Delta like canonical Notch ligand 4.	Notch receptor 1.	0.989
DLL4	NOTCH2	ENSPCAP00000013737	ENSPCAP00000002615	Delta like canonical Notch ligand 4.	Notch receptor 2.	0.916
DLL4	NOTCH3	ENSPCAP00000013737	ENSPCAP00000013459	Delta like canonical Notch ligand 4.	Notch receptor 3.	0.966
DLL4	NOTCH4	ENSPCAP00000013737	ENSPCAP00000012002	Delta like canonical Notch ligand 4.	Notch receptor 4.	0.968
ENSPCAP00000007418	DLL4	ENSPCAP00000007418	ENSPCAP00000013737	annotation not available	Delta like canonical Notch ligand 4.	0.882
ENSPCAP00000007418	ENSPCAP00000009465	ENSPCAP00000007418	ENSPCAP00000009465	annotation not available	annotation not available	0.818
ENSPCAP00000007418	LFNG	ENSPCAP00000007418	ENSPCAP00000003196	annotation not available	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.895
ENSPCAP00000007418	MFNG	ENSPCAP00000007418	ENSPCAP00000001743	annotation not available	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.888
ENSPCAP00000007418	NOTCH1	ENSPCAP00000007418	ENSPCAP00000007677	annotation not available	Notch receptor 1.	0.934
ENSPCAP00000007418	NOTCH3	ENSPCAP00000007418	ENSPCAP00000013459	annotation not available	Notch receptor 3.	0.933
ENSPCAP00000007418	NOTCH4	ENSPCAP00000007418	ENSPCAP00000012002	annotation not available	Notch receptor 4.	0.950
ENSPCAP00000009465	DLL4	ENSPCAP00000009465	ENSPCAP00000013737	annotation not available	Delta like canonical Notch ligand 4.	0.882
ENSPCAP00000009465	ENSPCAP00000007418	ENSPCAP00000009465	ENSPCAP00000007418	annotation not available	annotation not available	0.818
ENSPCAP00000009465	LFNG	ENSPCAP00000009465	ENSPCAP00000003196	annotation not available	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.895