STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BABAM2BRISC and BRCA1 A complex member 2. (395 aa)    
Predicted Functional Partners:
ENSPCAP00000009224
annotation not available
    
 0.998
ENSPCAP00000010029
annotation not available
    
 0.998
UIMC1
Ubiquitin interaction motif containing 1.
    
 0.995
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.995
ENSPCAP00000004702
annotation not available
    
 0.993
ENSPCAP00000012584
annotation not available
    
 0.932
BARD1
BRCA1 associated RING domain 1.
   
 0.881
ENSPCAP00000014868
annotation not available
   
 0.829
SHMT1
Serine hydroxymethyltransferase 1.
    
  0.813
SHMT2
Serine hydroxymethyltransferase 2.
    
  0.813
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.