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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1Transcription elongation regulator 1. (1098 aa)    
Predicted Functional Partners:
MFAP1
Microfibril associated protein 1.
   
 0.982
PRPF38A
pre-mRNA processing factor 38A.
   
 0.977
ZMAT2
Zinc finger matrin-type 2.
    
  0.970
DDX46
DEAD-box helicase 46.
   
 0.966
CDC5L
Cell division cycle 5 like.
   
  0.953
SNW1
SNW domain containing 1.
   
 0.952
RBM22
RNA binding motif protein 22.
   
 0.952
CWC15
CWC15 spliceosome associated protein homolog.
   
  0.947
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.942
PRPF19
pre-mRNA processing factor 19.
    
 0.942
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.