ENSPCAP00000001760 protein (Procavia capensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSPCAP00000001760

annotation not available (360 aa)

Predicted Functional Partners:

HNRNPK

0.993

ENSPCAP00000004535

0.988

HNRNPM

0.988

ENSPCAP00000002824

0.981

ENSPCAP00000015872

0.980

ENSPCAP00000001062

0.979

HNRNPL

0.955

ENSPCAP00000009349

0.954

PCBP2

0.953

DDX5

0.945

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX5	ENSPCAP00000001062	ENSPCAP00000006650	ENSPCAP00000001062	DEAD-box helicase 5.	annotation not available	0.941
DDX5	ENSPCAP00000001760	ENSPCAP00000006650	ENSPCAP00000001760	DEAD-box helicase 5.	annotation not available	0.945
DDX5	ENSPCAP00000002824	ENSPCAP00000006650	ENSPCAP00000002824	DEAD-box helicase 5.	annotation not available	0.951
DDX5	ENSPCAP00000004535	ENSPCAP00000006650	ENSPCAP00000004535	DEAD-box helicase 5.	annotation not available	0.959
DDX5	ENSPCAP00000009349	ENSPCAP00000006650	ENSPCAP00000009349	DEAD-box helicase 5.	annotation not available	0.822
DDX5	ENSPCAP00000015872	ENSPCAP00000006650	ENSPCAP00000015872	DEAD-box helicase 5.	annotation not available	0.951
DDX5	HNRNPK	ENSPCAP00000006650	ENSPCAP00000015170	DEAD-box helicase 5.	Heterogeneous nuclear ribonucleoprotein K.	0.984
DDX5	HNRNPL	ENSPCAP00000006650	ENSPCAP00000006240	DEAD-box helicase 5.	Heterogeneous nuclear ribonucleoprotein L.	0.791
DDX5	HNRNPM	ENSPCAP00000006650	ENSPCAP00000009046	DEAD-box helicase 5.	Heterogeneous nuclear ribonucleoprotein M.	0.935
DDX5	PCBP2	ENSPCAP00000006650	ENSPCAP00000004840	DEAD-box helicase 5.	poly(rC) binding protein 2.	0.668
ENSPCAP00000001062	DDX5	ENSPCAP00000001062	ENSPCAP00000006650	annotation not available	DEAD-box helicase 5.	0.941
ENSPCAP00000001062	ENSPCAP00000001760	ENSPCAP00000001062	ENSPCAP00000001760	annotation not available	annotation not available	0.979
ENSPCAP00000001062	ENSPCAP00000002824	ENSPCAP00000001062	ENSPCAP00000002824	annotation not available	annotation not available	0.985
ENSPCAP00000001062	ENSPCAP00000004535	ENSPCAP00000001062	ENSPCAP00000004535	annotation not available	annotation not available	0.993
ENSPCAP00000001062	ENSPCAP00000015872	ENSPCAP00000001062	ENSPCAP00000015872	annotation not available	annotation not available	0.984
ENSPCAP00000001062	HNRNPK	ENSPCAP00000001062	ENSPCAP00000015170	annotation not available	Heterogeneous nuclear ribonucleoprotein K.	0.999
ENSPCAP00000001062	HNRNPL	ENSPCAP00000001062	ENSPCAP00000006240	annotation not available	Heterogeneous nuclear ribonucleoprotein L.	0.996
ENSPCAP00000001062	HNRNPM	ENSPCAP00000001062	ENSPCAP00000009046	annotation not available	Heterogeneous nuclear ribonucleoprotein M.	0.988
ENSPCAP00000001062	PCBP2	ENSPCAP00000001062	ENSPCAP00000004840	annotation not available	poly(rC) binding protein 2.	0.896
ENSPCAP00000001760	DDX5	ENSPCAP00000001760	ENSPCAP00000006650	annotation not available	DEAD-box helicase 5.	0.945