PPP2CA protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

PPP2CA

Protein phosphatase 2 catalytic subunit alpha. (308 aa)

Predicted Functional Partners:

PPP2R5B

0.992

STRN3

0.991

PTPA

0.991

ENSPCAP00000006868

0.990

STRN

0.989

CTTNBP2NL

0.989

ENSPCAP00000012283

0.989

STRN4

0.988

ENSPCAP00000008914

0.987

STRIP1

0.987

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTTNBP2NL	ENSPCAP00000008914	ENSPCAP00000009510	ENSPCAP00000008914	CTTNBP2 N-terminal like.	annotation not available	0.997
CTTNBP2NL	PPP2CA	ENSPCAP00000009510	ENSPCAP00000001766	CTTNBP2 N-terminal like.	Protein phosphatase 2 catalytic subunit alpha.	0.989
CTTNBP2NL	STRIP1	ENSPCAP00000009510	ENSPCAP00000011764	CTTNBP2 N-terminal like.	Striatin interacting protein 1.	0.998
CTTNBP2NL	STRN	ENSPCAP00000009510	ENSPCAP00000004243	CTTNBP2 N-terminal like.	Striatin.	0.998
CTTNBP2NL	STRN3	ENSPCAP00000009510	ENSPCAP00000007843	CTTNBP2 N-terminal like.	Striatin 3.	0.998
CTTNBP2NL	STRN4	ENSPCAP00000009510	ENSPCAP00000005985	CTTNBP2 N-terminal like.	Striatin 4.	0.998
ENSPCAP00000006868	PPP2CA	ENSPCAP00000006868	ENSPCAP00000001766	annotation not available	Protein phosphatase 2 catalytic subunit alpha.	0.990
ENSPCAP00000006868	PPP2R5B	ENSPCAP00000006868	ENSPCAP00000007638	annotation not available	Protein phosphatase 2 regulatory subunit B'beta.	0.979
ENSPCAP00000006868	PTPA	ENSPCAP00000006868	ENSPCAP00000014957	annotation not available	Protein phosphatase 2 phosphatase activator.	0.971
ENSPCAP00000006868	STRN4	ENSPCAP00000006868	ENSPCAP00000005985	annotation not available	Striatin 4.	0.473
ENSPCAP00000008914	CTTNBP2NL	ENSPCAP00000008914	ENSPCAP00000009510	annotation not available	CTTNBP2 N-terminal like.	0.997
ENSPCAP00000008914	PPP2CA	ENSPCAP00000008914	ENSPCAP00000001766	annotation not available	Protein phosphatase 2 catalytic subunit alpha.	0.987
ENSPCAP00000008914	STRIP1	ENSPCAP00000008914	ENSPCAP00000011764	annotation not available	Striatin interacting protein 1.	0.997
ENSPCAP00000008914	STRN	ENSPCAP00000008914	ENSPCAP00000004243	annotation not available	Striatin.	0.997
ENSPCAP00000008914	STRN3	ENSPCAP00000008914	ENSPCAP00000007843	annotation not available	Striatin 3.	0.998
ENSPCAP00000008914	STRN4	ENSPCAP00000008914	ENSPCAP00000005985	annotation not available	Striatin 4.	0.997
ENSPCAP00000012283	PPP2CA	ENSPCAP00000012283	ENSPCAP00000001766	annotation not available	Protein phosphatase 2 catalytic subunit alpha.	0.989
ENSPCAP00000012283	PPP2R5B	ENSPCAP00000012283	ENSPCAP00000007638	annotation not available	Protein phosphatase 2 regulatory subunit B'beta.	0.744
ENSPCAP00000012283	PTPA	ENSPCAP00000012283	ENSPCAP00000014957	annotation not available	Protein phosphatase 2 phosphatase activator.	0.968
PPP2CA	CTTNBP2NL	ENSPCAP00000001766	ENSPCAP00000009510	Protein phosphatase 2 catalytic subunit alpha.	CTTNBP2 N-terminal like.	0.989