STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001769annotation not available (363 aa)    
Predicted Functional Partners:
PRPF3
pre-mRNA processing factor 3.
   
   0.756
E4F1
E4F transcription factor 1.
   
   0.685
PRPF4
pre-mRNA processing factor 4.
    
   0.645
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.614
DHX15
DEAH-box helicase 15.
    
   0.573
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
  
 0.536
ARFRP1
ADP ribosylation factor related protein 1.
   
  
 0.532
SLC25A20
Solute carrier family 25 member 20.
 
    
 0.521
GMEB2
Glucocorticoid modulatory element binding protein 2.
   
  
 0.485
ENSPCAP00000007163
annotation not available
    
   0.469
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.