STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specific factor 2.
    
 0.998
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.998
SYMPK
Symplekin.
    
 0.997
WDR33
WD repeat domain 33.
   
 0.997
ENSPCAP00000007952
annotation not available
    
 0.997
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.997
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
   
 0.996
ENSPCAP00000006073
annotation not available
   
 0.996
WDR82
WD repeat domain 82.
    
 0.991
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.990
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.