close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 0.999
WDR33
WD repeat domain 33.
    
 0.999
ENSPCAP00000007952
annotation not available
    
 0.999
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.999
CPSF2
Cleavage and polyadenylation specific factor 2.
    
 0.999
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.997
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.997
ENSPCAP00000006073
annotation not available
    
 0.994
WDR82
WD repeat domain 82.
    
 0.994
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
   
 0.993
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.