Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD3FERM and PDZ domain containing 3. (1772 aa)    
Predicted Functional Partners:
GPSM2
G protein signaling modulator 2.
    
 
 0.801
USP20
Ubiquitin specific peptidase 20.
      
 0.581
GPSM1
G protein signaling modulator 1.
    
 
 0.550
AKIRIN2
Akirin 2.
      
 0.528
CARD10
Caspase recruitment domain family member 10.
    
 
 0.508
TMEM132E
Transmembrane protein 132E.
   
  
 0.508
HBS1L
HBS1 like translational GTPase.
      
 0.502
MROH2B
Maestro heat like repeat family member 2B.
   
  
 0.465
ENSPCAP00000007333
annotation not available
      
 0.461
SLC45A4
Solute carrier family 45 member 4.
   
  
 0.430
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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