PHF10 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene co-occurrence

gene fusions

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[Homology]

Score

PHF10

PHD finger protein 10. (411 aa)

Predicted Functional Partners:

SMARCE1

0.998

ENSPCAP00000004559

0.998

SMARCD1

0.998

ENSPCAP00000008517

0.997

BRD7

0.997

PBRM1

0.996

ENSPCAP00000008078

0.996

ARID2

0.996

SMARCC1

0.992

SMARCC2

0.992

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID2	BRD7	ENSPCAP00000014366	ENSPCAP00000009591	AT-rich interaction domain 2.	Bromodomain containing 7.	0.998
ARID2	ENSPCAP00000004559	ENSPCAP00000014366	ENSPCAP00000004559	AT-rich interaction domain 2.	annotation not available	0.998
ARID2	ENSPCAP00000008078	ENSPCAP00000014366	ENSPCAP00000008078	AT-rich interaction domain 2.	annotation not available	0.997
ARID2	ENSPCAP00000008517	ENSPCAP00000014366	ENSPCAP00000008517	AT-rich interaction domain 2.	annotation not available	0.997
ARID2	PBRM1	ENSPCAP00000014366	ENSPCAP00000001837	AT-rich interaction domain 2.	Polybromo 1.	0.999
ARID2	PHF10	ENSPCAP00000014366	ENSPCAP00000001793	AT-rich interaction domain 2.	PHD finger protein 10.	0.996
ARID2	SMARCC1	ENSPCAP00000014366	ENSPCAP00000005196	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.993
ARID2	SMARCC2	ENSPCAP00000014366	ENSPCAP00000005727	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.	0.993
ARID2	SMARCD1	ENSPCAP00000014366	ENSPCAP00000010982	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.998
ARID2	SMARCE1	ENSPCAP00000014366	ENSPCAP00000001160	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.998
BRD7	ARID2	ENSPCAP00000009591	ENSPCAP00000014366	Bromodomain containing 7.	AT-rich interaction domain 2.	0.998
BRD7	ENSPCAP00000004559	ENSPCAP00000009591	ENSPCAP00000004559	Bromodomain containing 7.	annotation not available	0.997
BRD7	ENSPCAP00000008078	ENSPCAP00000009591	ENSPCAP00000008078	Bromodomain containing 7.	annotation not available	0.991
BRD7	ENSPCAP00000008517	ENSPCAP00000009591	ENSPCAP00000008517	Bromodomain containing 7.	annotation not available	0.844
BRD7	PBRM1	ENSPCAP00000009591	ENSPCAP00000001837	Bromodomain containing 7.	Polybromo 1.	0.998
BRD7	PHF10	ENSPCAP00000009591	ENSPCAP00000001793	Bromodomain containing 7.	PHD finger protein 10.	0.997
BRD7	SMARCC1	ENSPCAP00000009591	ENSPCAP00000005196	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.988
BRD7	SMARCC2	ENSPCAP00000009591	ENSPCAP00000005727	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.	0.988
BRD7	SMARCD1	ENSPCAP00000009591	ENSPCAP00000010982	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.996
BRD7	SMARCE1	ENSPCAP00000009591	ENSPCAP00000001160	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.997