STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRNT1tRNA nucleotidyl transferase 1. (383 aa)    
Predicted Functional Partners:
TTI1
TELO2 interacting protein 1.
    
 0.945
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
 0.935
ENSPCAP00000015977
annotation not available
    
 0.925
ENSPCAP00000014065
annotation not available
    
   0.868
GNB1L
G protein subunit beta 1 like.
  
 0.827
TRRAP
Transformation/transcription domain associated protein.
    
 0.774
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
 0.733
APMAP
Adipocyte plasma membrane associated protein.
  
 0.733
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 
 0.732
ENSPCAP00000003240
annotation not available
  
   0.728
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.