ENSPCAP00000001808 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

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[Homology]

Score

ENSPCAP00000001808

annotation not available (1932 aa)

Predicted Functional Partners:

MYL3

0.932

MYL4

0.932

MYBPC3

0.922

MYL6B

0.816

MYL6

0.816

ACTC1

0.793

MYL10

0.790

MYL2

0.790

MYLPF

0.770

TNNI1

0.769

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTC1	ENSPCAP00000001808	ENSPCAP00000003604	ENSPCAP00000001808	Actin alpha cardiac muscle 1.	annotation not available	0.793
ACTC1	MYBPC3	ENSPCAP00000003604	ENSPCAP00000015458	Actin alpha cardiac muscle 1.	Myosin binding protein C, cardiac.	0.401
ACTC1	MYL10	ENSPCAP00000003604	ENSPCAP00000001719	Actin alpha cardiac muscle 1.	Myosin light chain 10.	0.617
ACTC1	MYL2	ENSPCAP00000003604	ENSPCAP00000004084	Actin alpha cardiac muscle 1.	Myosin light chain 2.	0.617
ACTC1	MYL3	ENSPCAP00000003604	ENSPCAP00000005077	Actin alpha cardiac muscle 1.	Myosin light chain 3.	0.886
ACTC1	MYL4	ENSPCAP00000003604	ENSPCAP00000013798	Actin alpha cardiac muscle 1.	Myosin light chain 4.	0.886
ACTC1	MYL6	ENSPCAP00000003604	ENSPCAP00000005542	Actin alpha cardiac muscle 1.	Myosin light chain 6.	0.771
ACTC1	MYL6B	ENSPCAP00000003604	ENSPCAP00000005497	Actin alpha cardiac muscle 1.	Myosin light chain 6B.	0.761
ACTC1	MYLPF	ENSPCAP00000003604	ENSPCAP00000008387	Actin alpha cardiac muscle 1.	Myosin light chain, phosphorylatable, fast skeletal muscle.	0.761
ACTC1	TNNI1	ENSPCAP00000003604	ENSPCAP00000003368	Actin alpha cardiac muscle 1.	Troponin I1, slow skeletal type.	0.769
ENSPCAP00000001808	ACTC1	ENSPCAP00000001808	ENSPCAP00000003604	annotation not available	Actin alpha cardiac muscle 1.	0.793
ENSPCAP00000001808	MYBPC3	ENSPCAP00000001808	ENSPCAP00000015458	annotation not available	Myosin binding protein C, cardiac.	0.922
ENSPCAP00000001808	MYL10	ENSPCAP00000001808	ENSPCAP00000001719	annotation not available	Myosin light chain 10.	0.790
ENSPCAP00000001808	MYL2	ENSPCAP00000001808	ENSPCAP00000004084	annotation not available	Myosin light chain 2.	0.790
ENSPCAP00000001808	MYL3	ENSPCAP00000001808	ENSPCAP00000005077	annotation not available	Myosin light chain 3.	0.932
ENSPCAP00000001808	MYL4	ENSPCAP00000001808	ENSPCAP00000013798	annotation not available	Myosin light chain 4.	0.932
ENSPCAP00000001808	MYL6	ENSPCAP00000001808	ENSPCAP00000005542	annotation not available	Myosin light chain 6.	0.816
ENSPCAP00000001808	MYL6B	ENSPCAP00000001808	ENSPCAP00000005497	annotation not available	Myosin light chain 6B.	0.816
ENSPCAP00000001808	MYLPF	ENSPCAP00000001808	ENSPCAP00000008387	annotation not available	Myosin light chain, phosphorylatable, fast skeletal muscle.	0.770
ENSPCAP00000001808	TNNI1	ENSPCAP00000001808	ENSPCAP00000003368	annotation not available	Troponin I1, slow skeletal type.	0.769