STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001823annotation not available (176 aa)    
Predicted Functional Partners:
ENSPCAP00000005104
annotation not available
   
 
 0.928
CYP19A1
Cytochrome P450 family 19 subfamily A member 1.
  
 
 0.923
RDH10
Retinol dehydrogenase 10.
     
 0.922
DHRS11
Dehydrogenase/reductase 11.
     
 0.916
LRAT
Lecithin retinol acyltransferase.
     
 0.915
ENSPCAP00000008668
annotation not available
   
 
 0.903
RDH12
Retinol dehydrogenase 12.
   
 
 0.903
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
   
 0.895
ALDH1A1
Aldehyde dehydrogenase 1 family member A1.
  
 0.893
BCO1
Beta-carotene oxygenase 1.
   
 
 0.887
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.