STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF19pre-mRNA processing factor 19. (503 aa)    
Predicted Functional Partners:
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.999
XAB2
XPA binding protein 2.
   
 0.999
CDC5L
Cell division cycle 5 like.
   
 0.999
PLRG1
Pleiotropic regulator 1.
   
0.999
BCAS2
BCAS2 pre-mRNA processing factor.
   
 0.999
CWC15
CWC15 spliceosome associated protein homolog.
    
 0.998
ENSPCAP00000008890
annotation not available
    
 0.998
ENSPCAP00000010409
annotation not available
   
 
 0.991
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 
 0.990
PRPF8
pre-mRNA processing factor 8.
   
 
 0.990
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.