Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX10Sorting nexin 10. (200 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
    
 0.890
VPS29
VPS29 retromer complex component.
   
 0.877
VPS26A
VPS26, retromer complex component A.
    
 0.786
ENSPCAP00000011121
annotation not available
    
 0.786
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.752
SNX8
Sorting nexin 8.
    
 0.740
RPS6KC1
Ribosomal protein S6 kinase C1.
     
 0.718
GARS1
glycyl-tRNA synthetase 1.
      
 0.688
TBC1D5
TBC1 domain family member 5.
    
 0.681
WLS
Wnt ligand secretion mediator.
    
 0.649
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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