Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDH15Protocadherin related 15. (1933 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
   
 
 0.992
CDH23
Cadherin related 23.
   
 0.992
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
   
    0.972
LHFPL5
LHFPL tetraspan subfamily member 5.
    
 0.971
CDHR2
Cadherin related family member 2.
   
 0.964
USH1G
USH1 protein network component sans.
    
 0.912
NUDCD1
NudC domain containing 1.
    
 
 0.905
TMC2
Transmembrane channel like 2.
    
 0.894
CDHR1
Cadherin related family member 1.
   
 0.882
CDH8
Cadherin 8.
   
 0.882
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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