STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEFB110Defensin beta 110. (68 aa)    
Predicted Functional Partners:
DEFB136
Defensin beta 136.
     
 0.751
ENSPCAP00000010683
annotation not available
     
 0.748
ENSPCAP00000013114
annotation not available
   
 
 0.695
DEFB135
Defensin beta 135.
     
 0.694
DEFB116
Defensin beta 116.
     
 0.690
DEFB114
Defensin beta 114.
   
 
 0.687
ENSPCAP00000003364
annotation not available
   
 
 0.672
ENSPCAP00000006118
annotation not available
     
 0.662
ENSPCAP00000015624
annotation not available
     
 0.662
ENSPCAP00000003156
annotation not available
   
 
 0.534
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.