ENSPCAP00000001844 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSPCAP00000001844

annotation not available (673 aa)

Predicted Functional Partners:

SLU7

0.993

PNN

0.984

SNIP1

0.974

SRRM1

0.971

PTGES3

0.966

TRA2A

0.952

CDC40

0.943

DHX38

0.931

PRPF38A

0.930

FAM32A

0.915

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC40	DHX38	ENSPCAP00000003738	ENSPCAP00000010034	Cell division cycle 40.	DEAH-box helicase 38.	0.999
CDC40	ENSPCAP00000001844	ENSPCAP00000003738	ENSPCAP00000001844	Cell division cycle 40.	annotation not available	0.943
CDC40	FAM32A	ENSPCAP00000003738	ENSPCAP00000014098	Cell division cycle 40.	Family with sequence similarity 32 member A.	0.980
CDC40	PRPF38A	ENSPCAP00000003738	ENSPCAP00000012433	Cell division cycle 40.	pre-mRNA processing factor 38A.	0.807
CDC40	SLU7	ENSPCAP00000003738	ENSPCAP00000003129	Cell division cycle 40.	SLU7 homolog, splicing factor.	0.996
CDC40	SNIP1	ENSPCAP00000003738	ENSPCAP00000014641	Cell division cycle 40.	Smad nuclear interacting protein 1.	0.858
CDC40	SRRM1	ENSPCAP00000003738	ENSPCAP00000014193	Cell division cycle 40.	Serine and arginine repetitive matrix 1.	0.931
CDC40	TRA2A	ENSPCAP00000003738	ENSPCAP00000003858	Cell division cycle 40.	Transformer 2 alpha homolog.	0.530
DHX38	CDC40	ENSPCAP00000010034	ENSPCAP00000003738	DEAH-box helicase 38.	Cell division cycle 40.	0.999
DHX38	ENSPCAP00000001844	ENSPCAP00000010034	ENSPCAP00000001844	DEAH-box helicase 38.	annotation not available	0.931
DHX38	FAM32A	ENSPCAP00000010034	ENSPCAP00000014098	DEAH-box helicase 38.	Family with sequence similarity 32 member A.	0.730
DHX38	PRPF38A	ENSPCAP00000010034	ENSPCAP00000012433	DEAH-box helicase 38.	pre-mRNA processing factor 38A.	0.425
DHX38	SLU7	ENSPCAP00000010034	ENSPCAP00000003129	DEAH-box helicase 38.	SLU7 homolog, splicing factor.	0.996
DHX38	SNIP1	ENSPCAP00000010034	ENSPCAP00000014641	DEAH-box helicase 38.	Smad nuclear interacting protein 1.	0.692
DHX38	SRRM1	ENSPCAP00000010034	ENSPCAP00000014193	DEAH-box helicase 38.	Serine and arginine repetitive matrix 1.	0.929
DHX38	TRA2A	ENSPCAP00000010034	ENSPCAP00000003858	DEAH-box helicase 38.	Transformer 2 alpha homolog.	0.564
ENSPCAP00000001844	CDC40	ENSPCAP00000001844	ENSPCAP00000003738	annotation not available	Cell division cycle 40.	0.943
ENSPCAP00000001844	DHX38	ENSPCAP00000001844	ENSPCAP00000010034	annotation not available	DEAH-box helicase 38.	0.931
ENSPCAP00000001844	FAM32A	ENSPCAP00000001844	ENSPCAP00000014098	annotation not available	Family with sequence similarity 32 member A.	0.915
ENSPCAP00000001844	PNN	ENSPCAP00000001844	ENSPCAP00000005238	annotation not available	Pinin, desmosome associated protein.	0.984