STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC3Armadillo repeat containing 3. (859 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
   
 0.979
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.966
NME8
NME/NM23 family member 8.
   
 0.962
IQUB
IQ motif and ubiquitin domain containing.
   
 0.958
ENSPCAP00000009478
annotation not available
    
 
 0.954
TTC25
Tetratricopeptide repeat domain 25.
   
 0.872
ENSPCAP00000005678
annotation not available
   
 
 0.862
C5orf49
Chromosome 5 open reading frame 49.
   
 
 0.862
ENSPCAP00000013571
annotation not available
   
 0.856
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.820
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.