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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC3Armadillo repeat containing 3. (859 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.856
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.840
WDR90
WD repeat domain 90.
    
   0.823
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.783
ENSPCAP00000013571
annotation not available
   
 
 0.755
TTC25
Tetratricopeptide repeat domain 25.
    
 
 0.754
ENSPCAP00000005490
annotation not available
   
 
 0.736
ENSPCAP00000010568
annotation not available
   
 
 0.736
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.723
CCDC65
Coiled-coil domain containing 65.
   
 
 0.722
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.