STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YAE1YAE1 maturation factor of ABCE1. (226 aa)    
Predicted Functional Partners:
LTO1
LTO1 maturation factor of ABCE1.
   
 0.977
ABCE1
ATP binding cassette subfamily E member 1.
    
 
 0.938
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.910
CIAPIN1
Cytokine induced apoptosis inhibitor 1.
   
 
 0.854
ENSPCAP00000004318
annotation not available
     
 0.853
CIAO1
Cytosolic iron-sulfur assembly component 1.
    
 0.816
PRIM2
DNA primase subunit 2.
      
 0.675
PALB2
Partner and localizer of BRCA2.
     
  0.669
GLRX3
Glutaredoxin 3.
     
 0.664
ZC3H4
Zinc finger CCCH-type containing 4.
      
 0.662
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.