Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STN1STN1 subunit of CST complex. (369 aa)    
Predicted Functional Partners:
ENSPCAP00000010496
annotation not available
    
 0.999
CTC1
CST telomere replication complex component 1.
    
 0.999
POT1
Protection of telomeres 1.
   
 0.998
POLA1
DNA polymerase alpha 1, catalytic subunit.
   
 0.977
PRIM2
DNA primase subunit 2.
   
 0.973
ENSPCAP00000006644
annotation not available
   
 0.971
ENSPCAP00000009069
annotation not available
    
 0.970
MED25
Mediator complex subunit 25.
    
 0.965
MED27
Mediator complex subunit 27.
    
  0.959
MED1
Mediator complex subunit 1.
   
   0.955
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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