ATAD1 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ATAD1

ATPase family AAA domain containing 1. (332 aa)

Predicted Functional Partners:

GET3

0.943

ENSPCAP00000006533

0.918

PEX12

0.881

ENSPCAP00000012456

0.870

UBXN7

0.849

GET1

0.812

PEX16

0.804

PEX14

0.797

ABCD3

0.779

PEX3

0.767

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD3	ATAD1	ENSPCAP00000003692	ENSPCAP00000001867	ATP binding cassette subfamily D member 3.	ATPase family AAA domain containing 1.	0.779
ABCD3	ENSPCAP00000006533	ENSPCAP00000003692	ENSPCAP00000006533	ATP binding cassette subfamily D member 3.	annotation not available	0.997
ABCD3	ENSPCAP00000012456	ENSPCAP00000003692	ENSPCAP00000012456	ATP binding cassette subfamily D member 3.	annotation not available	0.737
ABCD3	PEX12	ENSPCAP00000003692	ENSPCAP00000003475	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 12.	0.829
ABCD3	PEX14	ENSPCAP00000003692	ENSPCAP00000014378	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 14.	0.849
ABCD3	PEX16	ENSPCAP00000003692	ENSPCAP00000014917	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 16.	0.859
ABCD3	PEX3	ENSPCAP00000003692	ENSPCAP00000011543	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 3.	0.953
ATAD1	ABCD3	ENSPCAP00000001867	ENSPCAP00000003692	ATPase family AAA domain containing 1.	ATP binding cassette subfamily D member 3.	0.779
ATAD1	ENSPCAP00000006533	ENSPCAP00000001867	ENSPCAP00000006533	ATPase family AAA domain containing 1.	annotation not available	0.918
ATAD1	ENSPCAP00000012456	ENSPCAP00000001867	ENSPCAP00000012456	ATPase family AAA domain containing 1.	annotation not available	0.870
ATAD1	GET1	ENSPCAP00000001867	ENSPCAP00000000008	ATPase family AAA domain containing 1.	Guided entry of tail-anchored proteins factor 1.	0.812
ATAD1	GET3	ENSPCAP00000001867	ENSPCAP00000014066	ATPase family AAA domain containing 1.	Guided entry of tail-anchored proteins factor 3, ATPase.	0.943
ATAD1	PEX12	ENSPCAP00000001867	ENSPCAP00000003475	ATPase family AAA domain containing 1.	Peroxisomal biogenesis factor 12.	0.881
ATAD1	PEX14	ENSPCAP00000001867	ENSPCAP00000014378	ATPase family AAA domain containing 1.	Peroxisomal biogenesis factor 14.	0.797
ATAD1	PEX16	ENSPCAP00000001867	ENSPCAP00000014917	ATPase family AAA domain containing 1.	Peroxisomal biogenesis factor 16.	0.804
ATAD1	PEX3	ENSPCAP00000001867	ENSPCAP00000011543	ATPase family AAA domain containing 1.	Peroxisomal biogenesis factor 3.	0.767
ATAD1	UBXN7	ENSPCAP00000001867	ENSPCAP00000005321	ATPase family AAA domain containing 1.	UBX domain protein 7.	0.849
ENSPCAP00000006533	ABCD3	ENSPCAP00000006533	ENSPCAP00000003692	annotation not available	ATP binding cassette subfamily D member 3.	0.997
ENSPCAP00000006533	ATAD1	ENSPCAP00000006533	ENSPCAP00000001867	annotation not available	ATPase family AAA domain containing 1.	0.918
ENSPCAP00000006533	ENSPCAP00000012456	ENSPCAP00000006533	ENSPCAP00000012456	annotation not available	annotation not available	0.903