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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1ATPase family AAA domain containing 1. (332 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.982
ENSPCAP00000006533
annotation not available
    
 0.933
PEX12
Peroxisomal biogenesis factor 12.
    
 0.914
PEX3
Peroxisomal biogenesis factor 3.
    
 0.909
PEX14
Peroxisomal biogenesis factor 14.
    
 0.899
ENSPCAP00000012456
annotation not available
     
 0.859
PEX11A
Peroxisomal biogenesis factor 11 alpha.
    
 0.833
FAAP100
FA core complex associated protein 100.
   
 0.827
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.827
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.812
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.