Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX2Sorting nexin 2. (503 aa)    
Predicted Functional Partners:
SNX5
Sorting nexin 5.
   
 0.999
VPS35
VPS35 retromer complex component.
   
 0.999
VPS29
VPS29 retromer complex component.
   
 0.999
SNX1
Sorting nexin 1.
   
 0.999
VPS26A
VPS26, retromer complex component A.
   
 0.998
ENSPCAP00000011121
annotation not available
   
 0.998
SNX6
Sorting nexin 6.
   
 0.994
SNX32
Sorting nexin 32.
   
 0.994
ENSPCAP00000001472
annotation not available
   
 0.992
TBC1D5
TBC1 domain family member 5.
    
 0.989
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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