Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001872annotation not available (320 aa)    
Predicted Functional Partners:
RNF20
Ring finger protein 20.
    
 0.980
RNF40
Ring finger protein 40.
    
 0.980
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
    
 0.980
UBOX5
U-box domain containing 5.
    
 0.924
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.915
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 0.912
PCNA
Proliferating cell nuclear antigen.
    
 0.900
MVB12A
Multivesicular body subunit 12A.
    
   0.882
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
    
 0.857
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
     
 0.841
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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