STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFHD1EF-hand domain family member D1. (138 aa)    
Predicted Functional Partners:
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 
 0.784
ACTR2
Actin related protein 2.
   
   0.749
ARPC3
Actin related protein 2/3 complex subunit 3.
   
   0.701
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 0.656
MAPT
Microtubule associated protein tau.
    
   0.542
SCRN2
Secernin 2.
   
   0.483
ELP4
Elongator acetyltransferase complex subunit 4.
    
   0.473
ERMN
Ermin.
   
  
 0.462
ENSPCAP00000000978
annotation not available
      
 0.461
RGN
Regucalcin.
      
 0.449
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.