ZBED9 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

ZBED9

Zinc finger BED-type containing 9. (1326 aa)

Predicted Functional Partners:

ENSPCAP00000010722

0.947

ENSPCAP00000011253

0.840

MED14

0.802

ENSPCAP00000014868

0.798

ARID4A

0.791

ENSPCAP00000003739

0.791

MYSM1

0.743

MIB2

0.741

ENSPCAP00000004885

0.739

ENSPCAP00000007526

0.739

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	ENSPCAP00000003739	AT-rich interaction domain 4A.	annotation not available	0.862
ARID4A	ENSPCAP00000004885	ENSPCAP00000002075	ENSPCAP00000004885	AT-rich interaction domain 4A.	annotation not available	0.557
ARID4A	ENSPCAP00000007526	ENSPCAP00000002075	ENSPCAP00000007526	AT-rich interaction domain 4A.	annotation not available	0.604
ARID4A	ENSPCAP00000010722	ENSPCAP00000002075	ENSPCAP00000010722	AT-rich interaction domain 4A.	annotation not available	0.420
ARID4A	MED14	ENSPCAP00000002075	ENSPCAP00000003535	AT-rich interaction domain 4A.	Mediator complex subunit 14.	0.727
ARID4A	MYSM1	ENSPCAP00000002075	ENSPCAP00000012781	AT-rich interaction domain 4A.	Myb like, SWIRM and MPN domains 1.	0.835
ARID4A	ZBED9	ENSPCAP00000002075	ENSPCAP00000001878	AT-rich interaction domain 4A.	Zinc finger BED-type containing 9.	0.791
ENSPCAP00000003739	ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.862
ENSPCAP00000003739	ENSPCAP00000004885	ENSPCAP00000003739	ENSPCAP00000004885	annotation not available	annotation not available	0.557
ENSPCAP00000003739	ENSPCAP00000007526	ENSPCAP00000003739	ENSPCAP00000007526	annotation not available	annotation not available	0.604
ENSPCAP00000003739	ENSPCAP00000010722	ENSPCAP00000003739	ENSPCAP00000010722	annotation not available	annotation not available	0.427
ENSPCAP00000003739	MED14	ENSPCAP00000003739	ENSPCAP00000003535	annotation not available	Mediator complex subunit 14.	0.606
ENSPCAP00000003739	MYSM1	ENSPCAP00000003739	ENSPCAP00000012781	annotation not available	Myb like, SWIRM and MPN domains 1.	0.843
ENSPCAP00000003739	ZBED9	ENSPCAP00000003739	ENSPCAP00000001878	annotation not available	Zinc finger BED-type containing 9.	0.791
ENSPCAP00000004885	ARID4A	ENSPCAP00000004885	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.557
ENSPCAP00000004885	ENSPCAP00000003739	ENSPCAP00000004885	ENSPCAP00000003739	annotation not available	annotation not available	0.557
ENSPCAP00000004885	ENSPCAP00000007526	ENSPCAP00000004885	ENSPCAP00000007526	annotation not available	annotation not available	0.998
ENSPCAP00000004885	ENSPCAP00000014868	ENSPCAP00000004885	ENSPCAP00000014868	annotation not available	annotation not available	0.900
ENSPCAP00000004885	MED14	ENSPCAP00000004885	ENSPCAP00000003535	annotation not available	Mediator complex subunit 14.	0.998
ENSPCAP00000004885	ZBED9	ENSPCAP00000004885	ENSPCAP00000001878	annotation not available	Zinc finger BED-type containing 9.	0.739