STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VPS8VPS8 subunit of CORVET complex. (1421 aa)    
Predicted Functional Partners:
TGFBRAP1
Transforming growth factor beta receptor associated protein 1.
   
 0.998
ENSPCAP00000005872
annotation not available
    
 0.998
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
   
 0.998
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
    
 0.998
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
   
 0.998
VPS41
VPS41 subunit of HOPS complex.
   
 0.995
VPS39
VPS39 subunit of HOPS complex.
   
 0.993
ENSPCAP00000013101
annotation not available
    
 0.989
STX17
Syntaxin 17.
   
 0.948
ENSPCAP00000010387
annotation not available
     
 0.942
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.