Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R16BProtein phosphatase 1 regulatory subunit 16B. (567 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
  
 0.949
PPP1R7
Protein phosphatase 1 regulatory subunit 7.
    
 0.858
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
  
 0.842
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
  
 0.842
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
   0.705
PPP1R14A
Protein phosphatase 1 regulatory inhibitor subunit 14A.
    
 0.680
TLCD3A
TLC domain containing 3A.
    
 
 0.625
ENSPCAP00000014868
annotation not available
    
 0.589
CDK5RAP2
CDK5 regulatory subunit associated protein 2.
    
 0.588
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.562
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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