STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHRF1Ubiquitin like with PHD and ring finger domains 1. (807 aa)    
Predicted Functional Partners:
DNMT1
DNA methyltransferase 1.
  
 0.992
USP7
Ubiquitin specific peptidase 7.
    
 
 0.959
LIG1
DNA ligase 1.
   
 
 0.948
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 
 0.838
ENSPCAP00000007321
annotation not available
   
 
 0.788
CDCA8
Cell division cycle associated 8.
   
  
 0.772
DNMT3A
DNA methyltransferase 3 alpha.
    
 
 0.770
CCNA2
Cyclin A2.
   
 
 0.754
DNMT3B
DNA methyltransferase 3 beta.
   
 0.739
HDAC1
Histone deacetylase 1.
   
 
 0.728
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.