Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UHRF1Ubiquitin like with PHD and ring finger domains 1. (807 aa)    
Predicted Functional Partners:
DNMT1
DNA methyltransferase 1.
  
 0.998
ENSPCAP00000015197
annotation not available
   
 
 0.983
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.973
LIG1
DNA ligase 1.
   
 
 0.970
USP7
Ubiquitin specific peptidase 7.
    
 
 0.969
DNMT3B
DNA methyltransferase 3 beta.
   
 0.968
DNMT3A
DNA methyltransferase 3 alpha.
   
 
 0.968
ENSPCAP00000007321
annotation not available
   
 
 0.960
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
   
 
 0.954
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.947
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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