STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPD3Small nuclear ribonucleoprotein D3 polypeptide. (126 aa)    
Predicted Functional Partners:
LSM10
LSM10, U7 small nuclear RNA associated.
   
 0.999
ENSPCAP00000010409
annotation not available
   
 0.999
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.999
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
   
 0.998
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.997
PRPF6
pre-mRNA processing factor 6.
   
 0.997
PRPF8
pre-mRNA processing factor 8.
   
 0.997
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.996
ENSPCAP00000010294
annotation not available
   
 0.996
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.992
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.