GNL3 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GNL3

G protein nucleolar 3. (546 aa)

Predicted Functional Partners:

GNL2

0.998

BOP1

0.996

PES1

0.996

ENSPCAP00000000904

0.994

WDR12

0.994

ENSPCAP00000005796

0.993

DDX18

0.992

MRTO4

0.991

NOC2L

0.991

ENSPCAP00000015177

0.991

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOP1	DDX18	ENSPCAP00000006451	ENSPCAP00000009601	BOP1 ribosomal biogenesis factor.	DEAD-box helicase 18.	0.999
BOP1	ENSPCAP00000000904	ENSPCAP00000006451	ENSPCAP00000000904	BOP1 ribosomal biogenesis factor.	annotation not available	0.997
BOP1	ENSPCAP00000005796	ENSPCAP00000006451	ENSPCAP00000005796	BOP1 ribosomal biogenesis factor.	annotation not available	0.996
BOP1	ENSPCAP00000015177	ENSPCAP00000006451	ENSPCAP00000015177	BOP1 ribosomal biogenesis factor.	annotation not available	0.989
BOP1	GNL2	ENSPCAP00000006451	ENSPCAP00000014784	BOP1 ribosomal biogenesis factor.	G protein nucleolar 2.	0.992
BOP1	GNL3	ENSPCAP00000006451	ENSPCAP00000001913	BOP1 ribosomal biogenesis factor.	G protein nucleolar 3.	0.996
BOP1	MRTO4	ENSPCAP00000006451	ENSPCAP00000001351	BOP1 ribosomal biogenesis factor.	MRT4 homolog, ribosome maturation factor.	0.997
BOP1	NOC2L	ENSPCAP00000006451	ENSPCAP00000012532	BOP1 ribosomal biogenesis factor.	NOC2 like nucleolar associated transcriptional repressor.	0.997
BOP1	PES1	ENSPCAP00000006451	ENSPCAP00000010800	BOP1 ribosomal biogenesis factor.	Pescadillo ribosomal biogenesis factor 1.	0.999
BOP1	WDR12	ENSPCAP00000006451	ENSPCAP00000007463	BOP1 ribosomal biogenesis factor.	WD repeat domain 12.	0.999
DDX18	BOP1	ENSPCAP00000009601	ENSPCAP00000006451	DEAD-box helicase 18.	BOP1 ribosomal biogenesis factor.	0.999
DDX18	ENSPCAP00000000904	ENSPCAP00000009601	ENSPCAP00000000904	DEAD-box helicase 18.	annotation not available	0.994
DDX18	ENSPCAP00000005796	ENSPCAP00000009601	ENSPCAP00000005796	DEAD-box helicase 18.	annotation not available	0.995
DDX18	ENSPCAP00000015177	ENSPCAP00000009601	ENSPCAP00000015177	DEAD-box helicase 18.	annotation not available	0.997
DDX18	GNL2	ENSPCAP00000009601	ENSPCAP00000014784	DEAD-box helicase 18.	G protein nucleolar 2.	0.992
DDX18	GNL3	ENSPCAP00000009601	ENSPCAP00000001913	DEAD-box helicase 18.	G protein nucleolar 3.	0.992
DDX18	MRTO4	ENSPCAP00000009601	ENSPCAP00000001351	DEAD-box helicase 18.	MRT4 homolog, ribosome maturation factor.	0.995
DDX18	NOC2L	ENSPCAP00000009601	ENSPCAP00000012532	DEAD-box helicase 18.	NOC2 like nucleolar associated transcriptional repressor.	0.994
DDX18	PES1	ENSPCAP00000009601	ENSPCAP00000010800	DEAD-box helicase 18.	Pescadillo ribosomal biogenesis factor 1.	0.996
DDX18	WDR12	ENSPCAP00000009601	ENSPCAP00000007463	DEAD-box helicase 18.	WD repeat domain 12.	0.997