close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX23DEAD-box helicase 23. (820 aa)    
Predicted Functional Partners:
PRPF6
pre-mRNA processing factor 6.
   
 0.998
PRPF8
pre-mRNA processing factor 8.
   
 0.998
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
  
 0.997
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 0.996
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
  
 0.996
TXNL4A
Thioredoxin like 4A.
    
 0.995
ENSPCAP00000010409
annotation not available
    
 0.986
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.983
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.982
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 0.982
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.