Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1054 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
   
 0.992
ENSPCAP00000002656
annotation not available
    
 0.991
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.974
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.965
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
  
 
 
0.954
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.952
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.950
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.950
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
  
 0.943
SF3B1
Splicing factor 3b subunit 1.
   
  0.940
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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