STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTR6Actin related protein 6. (396 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
    
 
 0.981
VPS72
Vacuolar protein sorting 72 homolog.
    
 
 0.955
RUVBL2
RuvB like AAA ATPase 2.
    
 
 0.953
ENSPCAP00000001742
annotation not available
    
 
 0.923
EP400
E1A binding protein p400.
    
 
 0.919
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 
 0.909
CCDC170
Coiled-coil domain containing 170.
    
 
 0.869
YEATS4
YEATS domain containing 4.
   
 
 0.857
CFDP1
Craniofacial development protein 1.
   
 
 0.735
ENSPCAP00000014601
annotation not available
   
   0.617
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.