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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTI1AVesicle transport through interaction with t-SNAREs 1A. (187 aa)    
Predicted Functional Partners:
VAMP4
Vesicle associated membrane protein 4.
   
 0.998
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate).
   
 0.997
YKT6
YKT6 v-SNARE homolog.
    
 0.996
STX8
Syntaxin 8.
    
 0.993
STX7
Syntaxin 7.
   
 0.992
STX6
Syntaxin 6.
    
 0.990
STX5
Syntaxin 5.
    
 
 0.990
ENSPCAP00000009737
annotation not available
   
 0.987
STX10
Syntaxin 10.
    
 0.986
NAPA
NSF attachment protein alpha.
    
 0.982
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.