STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VTI1AVesicle transport through interaction with t-SNAREs 1A. (187 aa)    
Predicted Functional Partners:
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate).
   
 0.999
VAMP4
Vesicle associated membrane protein 4.
   
 0.998
ENSPCAP00000009737
annotation not available
   
 0.998
STX8
Syntaxin 8.
   
 0.998
STX7
Syntaxin 7.
   
 0.998
STX5
Syntaxin 5.
    
 0.998
SNAP29
Synaptosome associated protein 29.
   
 0.997
VAMP3
Vesicle associated membrane protein 3.
   
 0.997
STX18
Syntaxin 18.
    
 0.996
STX6
Syntaxin 6.
   
 0.996
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.